Go to the documentation of this file. 1 #ifndef vtkExodusIIReaderPrivate_h
2 #define vtkExodusIIReaderPrivate_h
7 #include "vtkToolkits.h"
9 #include "vtksys/RegularExpression.hxx"
14 #include "vtk_exodusII.h"
15 #include "vtkIOExodusModule.h"
18 class vtkTypeInt64Array;
27 void PrintData( ostream& os,
vtkIndent indent );
32 int OpenFile(
const char* filename );
38 int RequestInformation();
76 void SetCacheSize(
double size);
79 vtkGetMacro(CacheSize,
double);
90 vtkGetMacro(SqueezePoints,
int);
94 void SetSqueezePoints(
int sp );
98 vtkBooleanMacro(SqueezePoints,
int);
101 int GetNumberOfNodes();
107 int GetNumberOfObjectsOfType(
int otype );
119 int GetNumberOfObjectArraysOfType(
int otype );
125 const char* GetObjectName(
int otype,
int i );
131 int GetObjectId(
int otype,
int i );
139 int GetObjectSize(
int otype,
int i );
145 int GetObjectStatus(
int otype,
int i );
152 int GetUnsortedObjectStatus(
int otype,
int i );
158 void SetObjectStatus(
int otype,
int i,
int stat );
165 void SetUnsortedObjectStatus(
int otype,
int i,
int stat );
171 const char* GetObjectArrayName(
int otype,
int i );
177 int GetNumberOfObjectArrayComponents(
int otype,
int i );
183 int GetObjectArrayStatus(
int otype,
int i );
189 void SetObjectArrayStatus(
int otype,
int i,
int stat );
197 int GetNumberOfObjectAttributes(
int objectType,
int objectIndex );
198 const char* GetObjectAttributeName(
int objectType,
200 int attributeIndex );
201 int GetObjectAttributeIndex(
int objectType,
203 const char* attribName );
204 int GetObjectAttributeStatus(
int objectType,
207 void SetObjectAttributeStatus(
int objectType,
209 int attribIndex,
int status );
216 vtkSetMacro(GenerateGlobalElementIdArray,
vtkTypeBool);
217 vtkGetMacro(GenerateGlobalElementIdArray,
vtkTypeBool);
220 vtkSetMacro(GenerateGlobalNodeIdArray,
vtkTypeBool);
221 vtkGetMacro(GenerateGlobalNodeIdArray,
vtkTypeBool);
224 vtkSetMacro(GenerateImplicitElementIdArray,
vtkTypeBool);
225 vtkGetMacro(GenerateImplicitElementIdArray,
vtkTypeBool);
228 vtkSetMacro(GenerateImplicitNodeIdArray,
vtkTypeBool);
229 vtkGetMacro(GenerateImplicitNodeIdArray,
vtkTypeBool);
240 vtkSetMacro(FileId,
int);
241 vtkGetMacro(FileId,
int);
244 {
return "GlobalVariableValues"; }
246 {
return "GlobalVariableNames"; }
248 virtual void SetApplyDisplacements(
vtkTypeBool d );
251 virtual void SetDisplacementMagnitude(
double s );
252 vtkGetMacro(DisplacementMagnitude,
double);
254 vtkSetMacro(HasModeShapes,
int);
255 vtkGetMacro(HasModeShapes,
int);
257 vtkSetMacro(ModeShapeTime,
double);
258 vtkGetMacro(ModeShapeTime,
double);
260 vtkSetMacro(AnimateModeShapes,
int);
261 vtkGetMacro(AnimateModeShapes,
int);
263 vtkSetMacro(IgnoreFileTime,
bool);
264 vtkGetMacro(IgnoreFileTime,
bool);
269 {
return &this->ModelParameters; }
424 this->SkipUpdateTimeInformation =
true;
454 {this->FastPathObjectType =
type;};
456 vtkSetStringMacro(FastPathIdType);
508 vtksys::RegularExpression& re,
612 int otyp,
int obj,
int conn_type,
int timeStep,
BlockInfoType* binfop );
616 int otyp,
int obj,
int conn_type,
int timeStep,
SetInfoType* sinfop );
751 std::map<int,std::vector<SetInfoType> >
SetInfo;
757 std::map<int,std::vector<MapInfoType> >
MapInfo;
797 struct ex_init_params ModelParameters;
874 #endif // vtkExodusIIReaderPrivate_h
internal parser used by vtkExodusIIReader.
BlockSetInfoType & operator=(const BlockSetInfoType &block)
vtkUnstructuredGrid * CachedConnectivity
Cached cell connectivity arrays for mesh.
vtkTypeBool GenerateGlobalNodeIdArray
void PrepareGeneratedArrayInfo()
Add generated array information to array info lists.
int AssembleOutputGlobalArrays(vtkIdType timeStep, int otyp, int oidx, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Add mesh-global field data such as QA records to the output mesh.
vtkTypeBool AnimateModeShapes
std::vector< int > BlockIndices
static const char * GetImplicitElementIdArrayName()
vtkExodusIIReader::ObjectType FastPathObjectType
int UpdateTimeInformation()
vtkMutableDirectedGraph * SIL
An editable directed graph.
std::map< int, std::vector< ArrayInfoType > > InitialArrayInfo
Maps an object type (EX_ELEM_BLOCK, EX_NODE_SET, ...) to a list of arrays defined on that type.
std::map< vtkIdType, vtkIdType > PointMap
A map from nodal IDs in an Exodus file to nodal IDs in the output mesh.
void InsertBlockPolyhedra(BlockInfoType *binfo, vtkIntArray *facesPerCell, vtkIdTypeArray *exoCellConn)
Insert polyhedral cells (called from InsertBlockCells when a block is polyhedral).
std::map< int, std::vector< MapInfoType > > MapInfo
Maps a map type (EX_ELEM_MAP, ..., EX_NODE_MAP) to a list of maps of that type.
double ModeShapeTime
The time value.
GlomTypes
Tags to indicate how single-component Exodus arrays are glommed (aggregated) into multi-component VTK...
vtkExodusIICache * Cache
A least-recently-used cache to hold raw arrays.
int AssembleOutputProceduralArrays(vtkIdType timeStep, int otyp, int oidx, vtkUnstructuredGrid *output)
Add procedurally generated arrays to an output mesh.
void InsertSetSides(vtkIdTypeArray *refs, int otyp, int obj, SetInfoType *sinfo)
Insert cells referenced by a side set.
int GetPartStatus(int idx)
int AssembleOutputPointMaps(vtkIdType timeStep, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Add maps to an output mesh.
std::vector< vtkStdString > OriginalNames
The name of each component of the array as defined by the Exodus file.
bool ProducedFastPathOutput
int StorageType
Storage type of array (a type that can be passed to vtkDataArray::Create())
int GetMaterialStatus(int idx)
static vtkObject * New()
Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
void SetPartStatus(int idx, int on)
record modification and/or execution time
std::map< int, std::vector< SetInfoType > > SetInfo
Maps a set type (EX_ELEM_SET, ..., EX_NODE_SET) to a list of sets of that type.
void SetFastPathObjectId(vtkIdType id)
void SetTimesOverrides(const std::vector< double > ×)
int AppWordSize
These aren't the variables you're looking for.
std::map< int, std::vector< int > > SortedObjectIndices
Maps an object type to vector of indices that reorder objects of that type by their IDs.
int GetObjectTypeIndexFromObjectType(int otyp)
Return the index of an object type (in a private list of all object types).
void SetInitialObjectStatus(int otype, const char *name, int stat)
For a given object type, creates and stores an ObjectInfoType object using the given name and status.
Read exodus 2 files .ex2.
int Id
User-assigned identification number.
vtkExodusIIReader * Parent
Pointer to owning reader...
std::vector< double > Times
A list of time steps for which results variables are stored.
void ClearConnectivityCaches()
Delete any cached connectivity information (for all blocks and sets)
abstract base class for most VTK objects
vtkExodusIIReaderParser * Parser
int Status
Whether or not the array should be loaded by RequestData.
int IsObjectTypeBlock(int otyp)
Does the specified object type match? Avoid using these...
A struct to hold information about Exodus objects (blocks, sets, maps)
vtkTypeBool GenerateObjectIdArray
int IsObjectTypeSet(int otyp)
abstract superclass for arrays of numeric data
void SetAssemblyStatus(int idx, int on)
int GetMapTypeFromObjectType(int otyp)
A struct to hold information about Exodus blocks.
ArrayInfoType * FindArrayInfoByName(int otyp, const char *name)
Find an ArrayInfo object for a specific object type using the name as a key.
Composite dataset that organizes datasets into blocks.
ObjectInfoType * GetSortedObjectInfo(int objectType, int objectIndex)
Return a pointer to the ObjectInfo of the specified type and index, but using indices sorted by objec...
static const char * GetGlobalVariableNamesArrayName()
A struct to hold information about Exodus sets.
int GetBlockConnTypeFromBlockType(int btyp)
Given a block type (EDGE_BLOCK, ...), return the associated block connectivity type (EDGE_BLOCK_CONN,...
std::vector< int > OriginalIndices
The index of each component of the array as ordered by the Exodus file.
void InsertBlockCells(int otyp, int obj, int conn_type, int timeStep, BlockInfoType *binfop)
Insert cells from a specified block into a mesh.
bool IsXMLMetadataValid()
static const char * GetGlobalElementIdArrayName()
Read Exodus II files (.exii)
std::vector< int > AttributeStatus
int GetConnTypeIndexFromConnType(int ctyp)
Return the index of an object type (in a private list of all object types).
int GetObjectTypeFromMapType(int mtyp)
Given a map type (NODE_MAP, EDGE_MAP, ...) return the associated object type (NODAL,...
std::vector< MaterialInfoType > MaterialInfo
const struct ex_init_params * GetModelParams() const
std::map< int, std::vector< ObjectInfoType > > InitialObjectInfo
Maps an object type (EX_ELEM_BLOCK, EX_NODE_SET, ...) to a list of objects defined on that type.
int GetNumberOfMaterials()
void GetInitialObjectArrayStatus(int otype, ArrayInfoType *info)
For a given array type, looks for an object in the collection of initial objects of the same name,...
void SetFastPathObjectType(vtkExodusIIReader::ObjectType type)
A struct to hold information about Exodus blocks.
std::map< int, std::vector< std::vector< vtkIdType > > > PolyhedralFaceConnArrays
Face connectivity for polyhedra.
const char * GetPartBlockInfo(int idx)
vtkDataArray * GetCacheOrRead(vtkExodusIICacheKey)
Return an array for the specified cache key.
int AssembleOutputPointArrays(vtkIdType timeStep, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Add the requested arrays to the output grid's point data.
int GetTemporalTypeFromObjectType(int otyp)
int AssembleOutputCellArrays(vtkIdType timeStep, int otyp, int oidx, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Add the requested arrays to the output grid's cell data.
int AssembleArraysOverTime(vtkMultiBlockDataSet *output)
Add fast-path time-varying data to field data of an output block or set.
void InsertSetCellCopies(vtkIdTypeArray *refs, int otyp, int obj, SetInfoType *sinfo)
Insert cells referenced by an edge, face, or element set.
std::map< int, std::vector< ArrayInfoType > > ArrayInfo
Maps an object type (EX_ELEM_BLOCK, EX_NODE_SET, ...) to a list of arrays.
int SqueezePoints
Should the reader output only points used by elements in the output mesh, or all the points.
int AssembleOutputConnectivity(vtkIdType timeStep, int otyp, int oidx, int conntypidx, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Read connectivity information and populate an unstructured grid with cells corresponding to a single ...
int GetBlockIndexFromFileGlobalId(int otyp, int refId)
Get the index of the block containing the entity referenced by the specified file-global ID.
const char * GetAssemblyName(int idx)
float DisplacementMagnitude
BlockInfoType * GetBlockFromFileGlobalId(int otyp, int refId)
Get the block containing the entity referenced by the specified file-global ID.
float ExodusVersion
The version of Exodus that wrote the currently open file (or a negative number otherwise).
vtkTypeBool HasModeShapes
vtkIdType FastPathObjectId
int AssembleOutputCellMaps(vtkIdType timeStep, int otyp, int oidx, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
std::map< int, std::vector< BlockInfoType > > BlockInfo
Maps a block type (EX_ELEM_BLOCK, EX_FACE_BLOCK, ...) to a list of blocks of that type.
a simple class to control print indentation
void InsertSetNodeCopies(vtkIdTypeArray *refs, int otyp, int obj, SetInfoType *sinfo)
Insert cells referenced by a node set.
int Exoid
The handle of the currently open file.
dynamic, self-adjusting array of int
int Status
Should the reader load this block?
vtkIdType AttributesPerEntry
ObjectInfoType * GetObjectInfo(int typeIndex, int objectIndex)
Return a pointer to the ObjectInfo of the specified type and index.
void RemoveBeginningAndTrailingSpaces(int len, char **names, int maxNameLength)
Function to trim space from names retrieved with ex_get_var_names.
This class holds metadata for an Exodus file.
void GlomArrayNames(int i, int num_obj, int num_vars, char **var_names, int *truth_tab)
Aggregate Exodus array names into VTK arrays with multiple components.
vtkIdType GetPolyhedronFaceConnectivity(vtkIdType fileLocalFaceId, vtkIdType *&facePtIds)
Fetch the face-connectivity for one face of one polyhedron.
void DetermineVtkCellType(BlockInfoType &binfo)
Determine the VTK cell type for a given edge/face/element block.
void InsertSetCells(int otyp, int obj, int conn_type, int timeStep, SetInfoType *sinfop)
Insert cells from a specified set into a mesh.
ArraySourceTypes
Tags to indicate the source of values for an array.
int IsObjectTypeMap(int otyp)
void GetInitialObjectStatus(int otype, ObjectInfoType *info)
For a given object type, looks for an object in the collection of initial objects of the same name,...
std::vector< int > BlockIndices
vtkTypeBool GenerateImplicitNodeIdArray
void SetMaterialStatus(int idx, int on)
int GlomType
The type of "glomming" performed.
const char * GetPartName(int idx)
A struct to hold information about time-varying arrays.
static const char * GetGlobalNodeIdArrayName()
int GetNumberOfAssemblies()
A struct to hold information about Exodus blocks or sets (they have some members in common)
vtkIdType GetSqueezePointId(BlockSetInfoType *bsinfop, int i)
Find or create a new SqueezePoint ID (unique sequential list of points referenced by cells in blocks/...
vtkTypeBool GenerateGlobalIdArray
dynamic, self-adjusting array of vtkIdType
vtkTypeBool ApplyDisplacements
int Components
The number of components in the array.
int VerifyIntegrationPointGlom(int nn, char **np, vtksys::RegularExpression &re, vtkStdString &field, vtkStdString &ele)
Returns true when order and text of names are consistent with integration points.
double CacheSize
The size of the cache in MiB.
vtkIdType NextSqueezePoint
The next vtk ID to use for a connectivity entry when point squeezing is on and no point ID exists.
vtkTypeBool GenerateImplicitElementIdArray
int GetNumberOfObjectsAtTypeIndex(int typeIndex)
Return the number of objects of the given type.
static const char * GetFileIdArrayName()
std::vector< int > BlockIndices
void FreePolyhedronFaceArrays()
Free any arrays held by PolyhedralFaceConnArrays (for polyhedral-face-connectivity lookup).
int Source
The source of the array (Result or Attribute)
vtkMutableDirectedGraph * GetSIL()
Returns the SIL. This valid only after BuildSIL() has been called.
void BuildSIL()
Build SIL. This must be called only after RequestInformation().
vtkIdType FileOffset
Id (1-based) of first entry in file-local list across all blocks in file.
bool SkipUpdateTimeInformation
~vtkExodusIIReaderPrivate() override
vtkStdString Name
The name of the array.
vtkTimeStamp InformationTimeStamp
Time stamp from last time we were in RequestInformation.
dataset represents arbitrary combinations of all possible cell types
ObjectInfoType * GetUnsortedObjectInfo(int objectType, int objectIndex)
Return a pointer to the ObjectInfo of the specified type and index, but using indices sorted by objec...
static const char * GetObjectIdArrayName()
vtkStdString OriginalName
vtkStdString Name
User-assigned name.
Wrapper around std::string to keep symbols short.
A struct to hold information about Exodus maps.
std::vector< vtkStdString > AttributeNames
vtkTypeBool GenerateGlobalElementIdArray
std::vector< int > ObjectTruth
A map describing which objects the variable is defined on.
int GetNumberOfTimeSteps()
Return the number of time steps in the open file.
std::vector< AssemblyInfoType > AssemblyInfo
int AssembleOutputPoints(vtkIdType timeStep, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Fill the output grid's point coordinates array.
std::map< vtkIdType, vtkIdType > ReversePointMap
A map from nodal ids in the output mesh to those in an Exodus file.
std::vector< PartInfoType > PartInfo
void AddPointArray(vtkDataArray *src, BlockSetInfoType *bsinfop, vtkUnstructuredGrid *output)
Add a point array to an output grid's point data, squeezing if necessary.
int GetSetTypeFromSetConnType(int sctyp)
Given a set connectivity type (NODE_SET_CONN, ...), return the associated object type (NODE_SET,...
static const char * GetGlobalVariableValuesArrayName()
void SetInitialObjectArrayStatus(int otype, const char *name, int stat)
For a given array type, creates and stores an ArrayInfoType object using the given name and status.
vtkExodusIIReaderPrivate()
const char * GetMaterialName(int idx)
int Size
Number of entries in this block.
int GetAssemblyStatus(int idx)
static const char * GetImplicitNodeIdArrayName()
virtual void SetParser(vtkExodusIIReaderParser *)
vtkTypeBool GenerateFileIdArray